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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5279666_5280574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5279666 - 5280574

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGAGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TGACCCTCATTT

Flanking Amino Acid:

QEEMIRDLEQGDVSETIRLF

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

70.2

0.5

1.1

77.2

Major PPT

64.5

0.33

1.1

61.9

43.7

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

49.5

0.04

1.8

67.89

42.6

Associated Gene:

Gene:

LIG3

Ensembl Gene ID:

ENSAPLG00000008964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009386

5269027 - 5283392

14366