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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5353936_5361679_F

Intron Information:

Intron Rank:

146754

Intron Class:

major

Intron Phase:

Intron Coordinates:

5353936 - 5361679

Intron Length:

7744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGATTG

5'SS Class:

major

3'SS Sequence:

GGTTCCTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TGTCGTGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

72.5

39.9

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

68.5

0.42

1.1

67.9

37.9

Minor 5ss

-1.5

3.1

47.6

47.9

Minor BPS

46.5

-0.1

2.3

69.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043321

5352933 - 5361962

9030