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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5369159_5515596_F

Intron Information:

Intron Rank:

146155

Intron Class:

major

Intron Phase:

Intron Coordinates:

5369159 - 5515596

Intron Length:

146438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATATAAATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGCCATATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

68.5

0.42

59.8

44.2

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

45.2

-0.2

1.8

61.73

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031778

5369029 - 5516039

147011