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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5515720_5517586_F

Intron Information:

Intron Rank:

146153

Intron Class:

major

Intron Phase:

Intron Coordinates:

5515720 - 5517586

Intron Length:

1867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

29.1

-2.4

3.4

38.3

46.7

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033933

5510978 - 5517807

6830

ENSAPLT00000023322

5510978 - 5519591

8614