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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5591195_5591386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5591195 - 5591386

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

TCCCCTCTAAGC

Flanking Amino Acid:

TSPECPHQAVIFKVKSGKEI

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

31.3

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

75.4

0.57

0.9

68.6

37.2

Minor 5ss

-1.8

2.7

42.8

36.9

Minor BPS

46.6

-0.2

1.9

55.94

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026310

5589916 - 5592492

2577