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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5591708_5596639_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5591708 - 5596639

Intron Length:

4932

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGCTCCG

5'SS Class:

major

3'SS Sequence:

ACTGCCTGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TCCACGAGAACT

Flanking Amino Acid:

GTPKPWSSARSPQGVQPPGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.2

63.2

42.7

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

45.1

-0.2

1.7

50.3

43.3

Minor 5ss

28.4

-2.5

41.6

Minor BPS

42.7

-0.4

2.3

62.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009741

5591526 - 5598279

6754