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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5596824_5597575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5596824 - 5597575

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

ACCCCTGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

ACCTTCCCACCC

Flanking Amino Acid:

HQELQRVAQKSQALSSALHH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

63.2

0.3

0.9

53.4

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

41.6

-0.6

48.79

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009741

5591526 - 5598279

6754