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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5599514_5599792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5599514 - 5599792

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

TCTCAATGAACT

Flanking Amino Acid:

ALCSPAVAHLDGVPTTCCFS

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

0.45

1.2

71.6

36.4

Major PPT

72.4

0.5

0.8

65.2

30.7

Minor 5ss

-1.4

47.2

42.5

Minor BPS

49.6

0.05

1.9

73.17

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023553

5598133 - 5600531

2399