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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5613723_5614405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5613723 - 5614405

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

LGSLDRSLGNTPSWMKTFET

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

87.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

42.7

-0.8

2.8

59.4

38.1

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010280

5612054 - 5630563

18510