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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5615280_5616024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5615280 - 5616024

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTGCCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TCTTACTGACAG

Flanking Amino Acid:

LLDITRLNYPHMVKYPQYLP

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

75.6

35.1

Major BPS

68.5

0.46

73.3

28.9

Major PPT

83.5

0.75

0.8

Minor 5ss

47.7

-0.2

2.8

71.6

38.3

Minor BPS

45.4

-0.4

54.58

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010280

5612054 - 5630563

18510