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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5621260_5621710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5621260 - 5621710

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

MYGVNYFPIAQNKNHTDLLL

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010280

5612054 - 5630563

18510