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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5624038_5628111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5624038 - 5628111

Intron Length:

4074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGAAC

5'SS Class:

major

3'SS Sequence:

TCTTCTGATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GCTTCTTCAACT

Flanking Amino Acid:

EITQHLFFLQVKKQILDEEI

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.3

38.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.8

0.56

0.9

73.8

35.9

Minor 5ss

-2.5

2.9

33.9

41.8

Minor BPS

69.1

0.68

1.5

80.88

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010280

5612054 - 5630563

18510