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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5646039_5646116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5646039 - 5646116

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGAT

5'SS Class:

major

3'SS Sequence:

GTTGTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATTTCTCATCT

Flanking Amino Acid:

RETSSLYKLQIHNVKPECLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

71.2

34.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

30.2

-2.3

3.2

36.5

41.7

Minor BPS

54.3

0.21

1.8

72.93

43.9

Associated Gene:

Gene:

NIPSNAP2

Ensembl Gene ID:

ENSAPLG00000010581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043099

5642007 - 5654769

12763

ENSAPLT00000011053

5642007 - 5655469

13463