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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5646163_5649019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5646163 - 5649019

Intron Length:

2857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTGTCTGTATTC

Flanking Amino Acid:

PECLDAYNKLCQEVLPKIHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

72.8

0.51

1.1

70.6

39.1

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

46.1

-0.3

2.2

58.18

41.7

Associated Gene:

Gene:

NIPSNAP2

Ensembl Gene ID:

ENSAPLG00000010581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043099

5642007 - 5654769

12763

ENSAPLT00000011053

5642007 - 5655469

13463