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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5649115_5651081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5649115 - 5651081

Intron Length:

1967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAGAT

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAA

U12 Branch Point Sequence:

CATGCATGAAAA

Flanking Amino Acid:

NTWYGEQDQAVHLWRYEGGY

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

67.8

37.5

Major BPS

49.7

-0

1.1

36.4

Major PPT

89.9

0.9

0.7

88.4

28.7

Minor 5ss

30.8

-2.2

3.7

45.6

Minor BPS

-0.3

1.9

56.2

42.2

Associated Gene:

Gene:

NIPSNAP2

Ensembl Gene ID:

ENSAPLG00000010581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043099

5642007 - 5654769

12763

ENSAPLT00000011053

5642007 - 5655469

13463