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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5651695_5652128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5651695 - 5652128

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ACAGTTTTAACA

Flanking Amino Acid:

IYELRSYQLRPGTMIEWGNY

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

34.8

Major BPS

89.7

0.98

0.7

89.9

Major PPT

88.3

0.86

0.7

84.9

29.9

Minor 5ss

-0.4

2.7

58.2

40.5

Minor BPS

59.2

0.28

1.4

61.43

39.2

Associated Gene:

Gene:

NIPSNAP2

Ensembl Gene ID:

ENSAPLG00000010581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043099

5642007 - 5654769

12763

ENSAPLT00000011053

5642007 - 5655469

13463