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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5678956_5679116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5678956 - 5679116

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

TCCTCCCTATTC

Flanking Amino Acid:

HTELADILTEAVVDSVLAVR

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

90.4

25.2

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

77.9

0.63

0.8

69.2

35.6

Minor 5ss

24.1

-3

40.6

45.6

Minor BPS

49.8

-0

62.45

43.6

Associated Gene:

Gene:

CCT6B

Ensembl Gene ID:

ENSAPLG00000010870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011369

5676317 - 5683327

7011