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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5680848_5681244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5680848 - 5681244

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTCC

5'SS Class:

major

3'SS Sequence:

TGAATTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

AATTGCTAAACT

Flanking Amino Acid:

LRRAKRRNMERLTLACGGTA

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

67.9

38.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

75.6

0.58

66.1

44.9

Minor 5ss

36.4

-1.5

2.9

45.4

42.7

Minor BPS

59.3

0.37

2.1

79.53

42.4

Associated Gene:

Gene:

CCT6B

Ensembl Gene ID:

ENSAPLG00000010870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011369

5676317 - 5683327

7011