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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5681342_5681764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5681342 - 5681764

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

ACCCTCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

AATGCCTAACCC

Flanking Amino Acid:

HAGLVYEYTLGEEKYTFIEK

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

75.8

0.64

65.8

Major PPT

75.9

0.58

0.8

68.4

31.3

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

48.6

-0.1

61.56

43.8

Associated Gene:

Gene:

CCT6B

Ensembl Gene ID:

ENSAPLG00000010870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011369

5676317 - 5683327

7011