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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5682372_5682717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5682372 - 5682717

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAG

U12 Branch Point Sequence:

GGTTATTTAGCT

Flanking Amino Acid:

GQLTGVDLNTGEPMVAAAAG

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.9

32.8

Major BPS

64.7

0.37

1.5

63.7

43.9

Major PPT

76.5

0.6

0.8

68.7

37.2

Minor 5ss

36.3

-1.6

41.5

Minor BPS

57.1

0.3

1.8

74.8

41.5

Associated Gene:

Gene:

CCT6B

Ensembl Gene ID:

ENSAPLG00000010870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011369

5676317 - 5683327

7011