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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5686086_5686711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5686086 - 5686711

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATAGCTTTAATC

Flanking Amino Acid:

MKKKVTQKLESAPWWLPIEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

66.6

0.5

1.3

69.19

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035097

5684270 - 5687535

3266

ENSAPLT00000011795

5684963 - 5689137

4175

ENSAPLT00000046196

5684270 - 5689137

4868