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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5686086_5687403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5686086 - 5687403

Intron Length:

1318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAC

U12 Branch Point Sequence:

TCTTCCTTGACA

Flanking Amino Acid:

MKKKVTQKLEKGCIPGETSF

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

49.6

-0

1.3

53.3

40.4

Major PPT

79.2

0.66

0.9

75.9

32.7

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

85.4

1.11

86.55

32.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039699

5684270 - 5687535

3266