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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5686757_5686989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5686757 - 5686989

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TAATGCTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATCTGTTCAATC

Flanking Amino Acid:

LPIEKAFWRQPAGPGSSIKD

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

71.4

0.48

43.8

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

48.7

-0.1

1.9

60.26

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035097

5684270 - 5687535

3266

ENSAPLT00000011795

5684963 - 5689137

4175