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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5687141_5687403_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5687141 - 5687403

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTACGTAGG

5'SS Class:

weak_major

3'SS Sequence:

TCTTCCTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAC

U12 Branch Point Sequence:

TCTTCCTTGACA

Flanking Amino Acid:

WEFAARGGLEQRLYPWGNKF

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.4

54.7

49.5

Major BPS

49.6

-0

1.3

53.3

40.4

Major PPT

79.2

0.66

0.9

75.9

32.7

Minor 5ss

-1.7

2.9

37.2

40.5

Minor BPS

85.4

1.11

86.55

32.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037809

5684963 - 5689137

4175

ENSAPLT00000011795

5684963 - 5689137

4175