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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5687991_5688520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5687991 - 5688520

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGGTGT

5'SS Class:

major

3'SS Sequence:

TCTTGTGTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTGTACAAAACC

Flanking Amino Acid:

VAAFSPQNNYGLYDLLGNTW

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

63.3

43.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

78.5

0.64

0.9

76.2

37.8

Minor 5ss

37.5

-1.4

3.6

52.8

46.3

Minor BPS

49.2

-0

2.1

68.34

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037809

5684963 - 5689137

4175

ENSAPLT00000036495

5684963 - 5689137

4175

ENSAPLT00000011795

5684963 - 5689137

4175

ENSAPLT00000046196

5684270 - 5689137

4868