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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5688653_5690857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5688653 - 5690857

Intron Length:

2205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGCATCTG

5'SS Class:

major

3'SS Sequence:

TTATGATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

GCTTTATGATTT

Flanking Amino Acid:

FRKFKVRVLPTHLQCQSKRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.1

53.5

Major BPS

84.6

0.86

41.2

Major PPT

80.2

0.68

0.9

73.9

40.4

Minor 5ss

31.2

-2.2

3.3

40.7

45.6

Minor BPS

45.3

-0.2

1.9

62.21

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028890

5688359 - 5691213

2855