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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5699819_5700383_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5699819 - 5700383

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCCCCATCC

5'SS Class:

major

3'SS Sequence:

GCCCGGGCCCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATGAG

U12 Branch Point Sequence:

ACCGCCAGCACC

Flanking Amino Acid:

SRSPALLALPVPAPAPASAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.3

52.9

42.3

Major BPS

47.7

-0.1

1.5

43.5

39.2

Major PPT

53.2

0.07

41.3

38.4

Minor 5ss

28.8

-2.4

43.6

Minor BPS

39.9

-0.8

2.1

46.05

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012821

5698818 - 5700489

1672