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Intron Name: Anas_platyrhynchos_platyrhynchos_20_573445_576838_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

573445 - 576838

Intron Length:

3394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTGT

5'SS Class:

major

3'SS Sequence:

GGGCTGGGTACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCTC

U12 Branch Point Sequence:

TGTTGCTTTTCT

Flanking Amino Acid:

EPFYRENGEKMDLCDTDSDE

Intron Amino Acid Position:

1316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

69.7

43.7

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

53.9

0.09

1.2

45.8

Minor 5ss

0.14

2.6

74.1

42.2

Minor BPS

41.5

-0.5

3.8

76.83

45.4

Associated Gene:

Gene:

TSPOAP1

Ensembl Gene ID:

ENSAPLG00000011861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012389

557151 - 624132

66982