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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5741121_5748412_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5741121 - 5748412

Intron Length:

7292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

GGGCTGCCTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

GGTCCTGTGACA

Flanking Amino Acid:

LEKILSGLEKGKTTPQGTRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

59.2

0.23

1.3

43.5

Major PPT

51.7

0.04

1.1

48.4

39.7

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

48.4

-0.1

61.33

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021213

5740821 - 5748559

7739