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Intron Name: Anas_platyrhynchos_platyrhynchos_20_577637_579589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

577637 - 579589

Intron Length:

1953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

KSSDKRTEVKMEQSVTKAPE

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

0.47

1.2

61.1

45.5

Major PPT

80.9

0.7

0.9

72.8

42.2

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

TSPOAP1

Ensembl Gene ID:

ENSAPLG00000011861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012389

557151 - 624132

66982