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Intron Name: Anas_platyrhynchos_platyrhynchos_20_580181_580975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

580181 - 580975

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CAATAAACAACT

Flanking Amino Acid:

GYAVYADGQKAIEVTSPTAG

Intron Amino Acid Position:

958

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

41.2

-0.5

2.1

58.31

43.4

Associated Gene:

Gene:

TSPOAP1

Ensembl Gene ID:

ENSAPLG00000011861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012389

557151 - 624132

66982