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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5818426_5828143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5818426 - 5828143

Intron Length:

9718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

GAATACTAAATT

Flanking Amino Acid:

DQKVVENTRRVYKGEFQLPD

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

77.7

33.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

91.6

0.94

0.7

84.6

Minor 5ss

39.2

-1.2

3.1

48.1

47.5

Minor BPS

0.14

1.8

68.12

42.3

Associated Gene:

Gene:

TPST1

Ensembl Gene ID:

ENSAPLG00000006925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047557

5810690 - 5830850

20161

ENSAPLT00000007189

5810690 - 5830850

20161