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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5829809_5830802_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

3UTR

Intron Coordinates:

5829809 - 5830802

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTCTGTTTC

5'SS Class:

weak_major

3'SS Sequence:

ATTTACTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.4

58.8

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.8

0.58

70.6

39.1

Minor 5ss

48.3

-0.2

2.5

62.4

42.3

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

TPST1

Ensembl Gene ID:

ENSAPLG00000006925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047557

5810690 - 5830850

20161