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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5858776_5861091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5858776 - 5861091

Intron Length:

2316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAAGAGC

5'SS Class:

major

3'SS Sequence:

TTTCTAATCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCCTTTCTAATC

Flanking Amino Acid:

QIQEDWELAERLQREEEEAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

61.5

43.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.6

0.69

0.8

78.5

33.5

Minor 5ss

32.4

-2

3.3

43.3

44.3

Minor BPS

0.07

1.6

61.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039054

5858590 - 5870501

11912

ENSAPLT00000007382

5858590 - 5870501

11912