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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5865474_5867008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5865474 - 5867008

Intron Length:

1535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

CTTAAATCAATT

Flanking Amino Acid:

LFLDTMSHKRDLSIEEQSEC

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

32.7

Major BPS

0.5

1.1

76.9

32.8

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

33.9

-1.8

3.3

40.8

45.4

Minor BPS

46.5

-0.1

67.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039054

5858590 - 5870501

11912

ENSAPLT00000007382

5858590 - 5870501

11912