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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5868552_5868900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5868552 - 5868900

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGAT

5'SS Class:

major

3'SS Sequence:

TTCTATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTATTTTACA

Flanking Amino Acid:

VSDMVVKAITDIIEMDSKRV

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.2

34.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

88.6

0.87

0.7

83.4

31.3

Minor 5ss

36.8

-1.5

3.1

49.5

46.8

Minor BPS

58.1

0.25

1.8

72.01

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039054

5858590 - 5870501

11912

ENSAPLT00000007382

5858590 - 5870501

11912