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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5869158_5870102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5869158 - 5870102

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTTTTGTTCATA

Flanking Amino Acid:

GEDGYYFTNLCCAVAFIEKL

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.4

0.62

0.9

72.4

37.8

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

47.9

-0.1

2.4

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039054

5858590 - 5870501

11912

ENSAPLT00000007382

5858590 - 5870501

11912