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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5884289_5884978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5884289 - 5884978

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCCGCTCTAAAT

Flanking Amino Acid:

KEIKSPEMTEDWNTFLLRFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.2

36.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

74.5

0.55

1.1

75.2

38.8

Minor 5ss

-1.6

3.5

49.3

47.2

Minor BPS

48.3

-0

1.9

65.15

45.5

Associated Gene:

Gene:

TMEM248

Ensembl Gene ID:

ENSAPLG00000007316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042894

5884130 - 5888099

3970

ENSAPLT00000007594

5884130 - 5888340

4211