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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5885265_5886315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5885265 - 5886315

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGGAA

U12 Branch Point Sequence:

TCTTTCTCAAAG

Flanking Amino Acid:

TIFGHQIGLSGRESHEEINI

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

68.8

42.3

Major BPS

53.4

0.09

1.4

55.1

42.1

Major PPT

72.4

0.5

73.8

28.7

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

58.2

0.12

1.7

64.47

43.3

Associated Gene:

Gene:

TMEM248

Ensembl Gene ID:

ENSAPLG00000007316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042894

5884130 - 5888099

3970

ENSAPLT00000007594

5884130 - 5888340

4211