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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5887426_5887877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5887426 - 5887877

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGGTTTTAATT

Flanking Amino Acid:

NPKLTVIVPDDDRSLINLHL

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.72

0.9

77.6

36.1

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

0.49

1.3

72.92

39.2

Associated Gene:

Gene:

TMEM248

Ensembl Gene ID:

ENSAPLG00000007316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007594

5884130 - 5888340

4211

ENSAPLT00000042894

5884130 - 5888099

3970