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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5916_6257_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5916 - 6257

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TGGGAGCCTCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

ATTGTCTCACCT

Flanking Amino Acid:

LHFLEKQKEIKPFEVSLQEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

69.9

41.1

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

59.9

0.22

1.1

47.4

45.7

Minor 5ss

41.4

-1

2.9

52.4

38.7

Minor BPS

0.11

1.9

73.91

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020589

5055 - 8928

3874