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Intron Name: Anas_platyrhynchos_platyrhynchos_20_5938795_5956377_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5938795 - 5956377

Intron Length:

17583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

GTCTCTGCAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTTAC

U12 Branch Point Sequence:

GCCACCTTACCT

Flanking Amino Acid:

LARYIHCPKPGDSLGAMEKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

70.1

40.6

Major BPS

60.1

0.25

51.3

35.1

Major PPT

48.1

-0.1

1.7

54.9

40.2

Minor 5ss

36.1

-1.6

47.1

41.5

Minor BPS

57.5

0.31

1.8

69.13

47.3

Associated Gene:

Gene:

LRRC75A

Ensembl Gene ID:

ENSAPLG00000007361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007628

5938157 - 5977024

38868