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Intron Name: Anas_platyrhynchos_platyrhynchos_20_594646_594988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

594646 - 594988

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCTTTCTTATTT

Flanking Amino Acid:

KQEEVRRLQQAQAEAKREHE

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.4

41.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

87.5

0.84

0.6

88.2

21.6

Minor 5ss

47.2

-0.3

2.6

66.5

44.6

Minor BPS

63.6

0.51

1.6

75.8

41.6

Associated Gene:

Gene:

TSPOAP1

Ensembl Gene ID:

ENSAPLG00000011861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012389

557151 - 624132

66982