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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6003455_6003795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6003455 - 6003795

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TATGGCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATGG

Flanking Amino Acid:

GGMKGILSNSWKRRYHSRRI

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.2

0.5

67.1

43.4

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

-0.2

1.9

57.83

44.7

Associated Gene:

Gene:

NCBP3

Ensembl Gene ID:

ENSAPLG00000007373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007666

5999654 - 6014644

14991