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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6011018_6012023_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6011018 - 6012023

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATCTCTTCATCT

Flanking Amino Acid:

VALDRDMMKKAIPKVRLDTI

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

81.4

0.71

0.8

76.4

32.2

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

55.5

0.25

1.8

74.31

42.8

Associated Gene:

Gene:

NCBP3

Ensembl Gene ID:

ENSAPLG00000007373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007666

5999654 - 6014644

14991