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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6038802_6049032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6038802 - 6049032

Intron Length:

10231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

ATTGCCTGACCT

Flanking Amino Acid:

KLAEQAERYDEMVESMKKVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

83.1

0.74

0.7

31.7

Minor 5ss

32.3

-2

3.3

39.1

40.7

Minor BPS

58.4

0.34

1.9

79.25

42.7

Associated Gene:

Gene:

YWHAE

Ensembl Gene ID:

ENSAPLG00000007551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007843

6038738 - 6059376

20639