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Intron Name: Anas_platyrhynchos_platyrhynchos_20_604054_607273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

604054 - 607273

Intron Length:

3220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GCGTTTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

TTGGCAGTGATA

Flanking Amino Acid:

ELQAKLIAGKDDPCCLNVVE

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

78.7

0.65

0.9

37.4

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

43.8

-0.4

2.3

58.67

41.7

Associated Gene:

Gene:

TSPOAP1

Ensembl Gene ID:

ENSAPLG00000011861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012389

557151 - 624132

66982