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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6065639_6066178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6065639 - 6066178

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

ACACTTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

GCATTTTTAGCA

Flanking Amino Acid:

LQALENEPIKYAVPVIKYDR

Intron Amino Acid Position:

922

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

0.61

0.9

73.5

36.1

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

54.4

0.13

1.5

60.17

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027147

6061088 - 6092694

31607

ENSAPLT00000008084

6062499 - 6092694

30196

ENSAPLT00000043899

6061088 - 6117297

56210