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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6068600_6069176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6068600 - 6069176

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTGACCAATC

Flanking Amino Acid:

KKKWAVETIRRFIKGFIYRN

Intron Amino Acid Position:

790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.4

28.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

81.4

0.71

0.7

80.1

25.3

Minor 5ss

32.6

-2

3.1

39.4

46.5

Minor BPS

43.6

-0.5

2.3

64.7

40.9

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008084

6062499 - 6092694

30196

ENSAPLT00000043899

6061088 - 6117297

56210

ENSAPLT00000027147

6061088 - 6092694

31607