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Intron Name: Anas_platyrhynchos_platyrhynchos_20_6069262_6069712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6069262 - 6069712

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTAGTGTAAAA

Flanking Amino Acid:

RKKFLHMKHSAIAIQSWWRG

Intron Amino Acid Position:

762

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

83.6

0.76

0.8

82.1

34.6

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

45.1

-0.3

2.4

64.89

41.7

Associated Gene:

Gene:

MYO1C

Ensembl Gene ID:

ENSAPLG00000007694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008084

6062499 - 6092694

30196

ENSAPLT00000043899

6061088 - 6117297

56210

ENSAPLT00000027147

6061088 - 6092694

31607